/[packages]/cauldron/R-base/current/SPECS/R-base.spec
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Revision 314784 - (hide annotations) (download)
Tue Nov 6 07:47:00 2012 UTC (7 years, 11 months ago) by fwang
File size: 7945 byte(s)
rebuild for new icu
1 ahmad 33319 %define libname %mklibname Rmath
2     # (tpg) really not needed
3     # for private copy in /usr/lib/R/share/perl/Text/DelimMatch.pm
4     %define _provides_exceptions KernSmooth.so\\|MASS.so\\|R_X11.so\\|class.so\\|cluster.so\\|foreign.so\\|grDevices.so\\|grid.so\\|internet.so\\|lapack.so\\|lattice.so\\|libRblas.so\\|libRlapack.so\\|methods.so\\|mgcv.so\\|nlme.so\\|nnet.so\\|rpart.so\\|spatial.so\\|splines.so\\|stats.so\\|survival.so\\|tcltk.so\\|tools.so\\|vfonts.so\\|perl\(R::.*\)
5     %define _requires_exceptions libRblas.so\\|libRlapack.so\\|perl\(R::.*\)
6    
7     %define _disable_ld_no_undefined 1
8    
9     %ifarch %mips %arm
10     %define use_java 0
11     %else
12     %define use_java 1
13     %endif
14    
15     Summary: A language for data analysis and graphics
16     Name: R-base
17 lmenut 284221 Version: 2.15.1
18 fwang 314784 Release: %mkrel 2
19 ahmad 33319 License: GPLv2+
20     Group: Sciences/Mathematics
21     URL: http://www.r-project.org
22     Source0: http://cran.r-project.org/src/base/R-2/R-%{version}.tar.gz
23     Source1: R-icons-png.tar.bz2
24 fwang 157612 Source2: R.bash_completion
25 lmenut 87267 Patch0: R-2.8.1-menu.patch
26     Patch1: R-2.13.0-disable-optimized-BLAS-test.patch
27 ahmad 33319 Patch5: R-2.10.1-gfxdemos.patch
28     BuildRequires: pth-devel
29     BuildRequires: glibc-static-devel
30     BuildRequires: gcc-c++
31     BuildRequires: cups-common
32     BuildRequires: bzip2-devel
33     BuildRequires: gcc-gfortran
34 lmenut 185416 BuildRequires: quadmath-devel
35 ahmad 33319 BuildRequires: gpm-devel
36     BuildRequires: ncurses-devel
37     BuildRequires: readline-devel
38     BuildRequires: tk-devel
39 ahmad 114998 BuildRequires: tcl
40 ahmad 33319 BuildRequires: tcl-devel
41     BuildRequires: texinfo
42 lmenut 284221 BuildRequires: texinfo-tex
43 lmenut 185416 BuildRequires: texlive
44     BuildRequires: texlive-fontsextra
45 fwang 147581 BuildRequires: libx11-devel
46     BuildRequires: libxmu-devel
47     BuildRequires: libxt-devel
48 ahmad 33319 BuildRequires: png-devel
49     BuildRequires: jpeg-devel
50 fwang 157611 BuildRequires: pcre-devel
51 ahmad 33319 BuildRequires: bison
52     BuildRequires: xdg-utils
53     %if %{use_java}
54     BuildRequires: java-rpmbuild
55     %endif
56     BuildRequires: paper-utils
57     BuildRequires: cairo-devel
58     BuildRequires: pango-devel
59     BuildRequires: libtiff-devel
60     BuildRequires: zip
61     BuildRequires: lapack-devel
62     BuildRequires: blas-devel
63     BuildRequires: gcc-objc
64     BuildRequires: gcc-objc++
65     BuildRequires: imake
66     BuildRequires: gettext-devel
67     BuildRequires: glibc-static-devel
68     BuildRequires: pth-devel
69     #BuildRequires: gnustep-make
70     #BuildRequires: libgnustep-base-devel
71     #BuildRequires: gnustep-base
72     BuildRequires: lzma-devel
73     BuildRequires: icu-devel
74     BuildRequires: paper-utils
75     Requires: tcl
76     Requires: tk
77     Requires: perl
78     Requires: sed
79     Requires: x11-font-adobe-100dpi
80     Provides: R
81     Obsoletes: R-recommended <= 1.5.1
82     Provides: R-recommended
83     BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-buildroot
84    
85     %description
86     `GNU S' - A language and environment for statistical computing and
87     graphics. R is similar to the S system, which was developed at Bell
88     Laboratories by John Chambers et al. It provides a wide variety of
89     statistical and graphical techniques (linear and nonlinear modelling,
90     statistical tests, time series analysis, classification, clustering, ...).
91    
92     R is designed as a true computer language with control-flow
93     constructions for iteration and alternation, and it allows users to
94     add additional functionality by defining new functions. For
95     computationally intensive tasks, C, C++ and Fortran code can be linked
96     and called at run time.
97    
98     %package -n %{libname}
99     Summary: Standalone math library from the R project
100     Group: Development/Other
101    
102     %description -n %{libname}
103     A standalone library of mathematical and statistical functions derived
104     from the R project. This packages provides the shared libRmath library.
105    
106     %package -n %{libname}-devel
107     Summary: Standalone math library from the R project
108     Group: Development/Other
109     Provides: libRmath-devel = %{version}-%{release}
110     Requires: %{libname} = %{version}-%{release}
111    
112     %description -n %{libname}-devel
113     A standalone library of mathematical and statistical functions derived
114     from the R project. This packages provides the static libRmath library
115     and header files.
116    
117     %prep
118     %setup -qn R-%{version}
119     %patch0 -p1
120 lmenut 87267 %patch1 -p1
121 ahmad 33319 %patch5 -p1
122    
123     #rm -f acinclude.m4
124     aclocal -I ./m4
125     autoconf --force
126     #autoreconf -fiv
127    
128     %build
129     export R_BROWSER="$(type -p xdg-open)"
130     export R_PDFVIEWER="$(type -p xdg-open)"
131     export R_PRINTCMD="lpr"
132    
133     # (tpg) try to not build with -ffast-math
134     export CFLAGS=$(echo "%{optflags}" | sed -e s/-ffast-math/-fno-fast-math/g )
135     export CFLAGS="%{optflags}"
136     export FFLAGS=$CFLAGS
137     export CXXFLAGS=$CFLAGS
138     export FCFLAGS=$CFLAGS
139     export OBJCFLAGS=$CFLAGS
140     export F77="gfortran"
141     %if %{use_java}
142     export JAVA_HOME="%{java_home}"
143     %endif
144     export FPICFLAGS=-fPIC
145     unset DISPLAY
146    
147     %configure2_5x \
148     --with-tcltk \
149     --with-tcl-config=%{_libdir}/tclConfig.sh \
150     --with-tk-config=%{_libdir}/tkConfig.sh \
151     --with-cairo \
152     --with-libpng \
153     --with-jpeglib \
154     --with-system-zlib \
155     --with-system-bzlib \
156 fwang 157611 --with-system-pcre \
157 ahmad 33319 --with-system-xz \
158     --with-ICU \
159     --with-readline \
160     --disable-BLAS-shlib \
161     --with-lapack=%{_libdir} \
162     --with-blas=%{_libdir} \
163     --enable-threads=pth \
164     --enable-R-profiling \
165     --enable-R-shlib
166    
167 fwang 157613 make
168 ahmad 33319
169     pushd src/nmath/standalone
170     make
171     popd
172    
173     %make pdf
174     %make info
175    
176     # DON'T comment "make check" below! If R doesn't pass the 'check' test
177     # then it is probably badly compiled, or there are problems with
178     # the compiler.
179 lmenut 87267 %check
180     make check
181 ahmad 33319
182    
183     %install
184     rm -rf %{buildroot}
185    
186 ahmad 114998 # N.B. don't use %%makeinstall because it sets prefix= which breaks Rscript
187     # mga#1434
188     %makeinstall_std install-info
189 ahmad 33319
190     pushd src/nmath/standalone
191     %makeinstall \
192     includedir=%{buildroot}%{_includedir} \
193     libdir=%{buildroot}%{_libdir}
194     popd
195    
196     mv doc/manual/*.pdf $RPM_BUILD_DIR/R-%{version} || :
197     # Add soft links (useful for TK gui)
198     for i in R-admin R-data refman R-exts R-FAQ R-intro R-lang; do
199     ln -s %{_datadir}/doc/R-base/${i}.pdf %{buildroot}%{_libdir}/R/doc/manual/${i}.pdf
200     done
201    
202     # Remove latex versions of help pages
203     #
204     rm -rf %{buildroot}%{_libdir}/R/library/*/latex/
205    
206     # Get rid of buildroot in script
207     for i in %{buildroot}%{_libdir}/R/bin/R %{buildroot}%{_bindir}/R %{buildroot}%{_libdir}/pkgconfig/libR*.pc;
208     do
209     sed -i "s|%{buildroot}||g" $i;
210     done
211    
212     # Remove package indices. They are rebuilt by the postinstall script.
213     #
214     rm -f %{buildroot}%{_libdir}/R/doc/html/function.html
215     rm -f %{buildroot}%{_libdir}/R/doc/html/packages.html
216     rm -f %{buildroot}%{_libdir}/R/doc/html/search/index.txt
217    
218     # Fix permissions
219     chmod 644 %{buildroot}%{_libdir}/R/library/MASS/scripts/*
220     chmod 755 %{buildroot}%{_libdir}/R/share/sh/echo.sh
221    
222     mkdir -p %{buildroot}%{_datadir}/applications
223 ahmad 33474 cat > %{buildroot}%{_datadir}/applications/mageia-%{name}.desktop <<EOF
224 ahmad 33319 [Desktop Entry]
225     Name=R
226     Comment=A language for statistical computing
227     Exec=%{_bindir}/R --gui=tk
228     Terminal=true
229     Type=Application
230     Icon=Rlogo
231     Categories=Science;Math;
232     EOF
233    
234     # icons
235     mkdir -p %{buildroot}%{_iconsdir}
236     tar xjf %{SOURCE1} -C %{buildroot}%{_iconsdir}
237    
238     # remove unpackaged files
239     rm -f %{buildroot}%{_infodir}/dir{,.old*}
240    
241     # remove private perl libraries
242     rm -rf %{buildroot}%{_libdir}/R/share/perl/File
243     rm -rf %{buildroot}%{_libdir}/R/share/perl/Text
244    
245     # (tpg) add bash completion file
246     mkdir -p %{buildroot}%{_sysconfdir}/bash_completion.d
247 fwang 157612 cp %{SOURCE2} %{buildroot}%{_sysconfdir}/bash_completion.d/R-base
248 ahmad 33319
249     %find_lang %{name}
250    
251    
252     %post
253     %_install_info R-admin.info
254     %_install_info R-data.info
255     %_install_info R-exts.info
256     %_install_info R-FAQ.info
257     %_install_info R-intro.info
258     %_install_info R-lang.info
259    
260     %preun
261     if [ $1 = 0 ]; then
262     %_remove_install_info R-admin.info
263     %_remove_install_info R-data.info
264     %_remove_install_info R-exts.info
265     %_remove_install_info R-FAQ.info
266     %_remove_install_info R-intro.info
267     %_remove_install_info R-lang.info
268     fi
269    
270     %files -f %{name}.lang
271     %doc README VERSION NEWS
272     %doc R-admin.pdf R-data.pdf R-exts.pdf R-FAQ.pdf R-intro.pdf R-lang.pdf refman.pdf
273     %{_sysconfdir}/bash_completion.d/*
274     %{_bindir}/R
275     %{_bindir}/Rscript
276     %{_mandir}/*/*
277     %{_libdir}/R
278     %{_infodir}/*.info*
279     %{_iconsdir}/*.*
280     %{_liconsdir}/*.*
281     %{_miconsdir}/*.*
282     %{_datadir}/applications/*.desktop
283     %{_libdir}/pkgconfig/libR.pc
284    
285     %files -n %{libname}
286     %{_libdir}/libRmath.so
287    
288     %files -n %{libname}-devel
289     %{_libdir}/libRmath.a
290     %{_includedir}/Rmath.h
291     %{_libdir}/pkgconfig/libRmath.pc

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